Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dkk1O54908 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Dkk1O54908 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Gm29664-201ENSMUST00000191125 463 ntBASIC14.41□□□□□ -0.1
Dkk1O54908 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.41□□□□□ -0.1
Dkk1O54908 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dkk1O54908 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.41□□□□□ -0.1
Dkk1O54908 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dkk1O54908 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dkk1O54908 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.41□□□□□ -0.1
Dkk1O54908 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Dkk1O54908 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC14.41□□□□□ -0.1
Dkk1O54908 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dkk1O54908 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.4□□□□□ -0.1
Dkk1O54908 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC14.4□□□□□ -0.1
Dkk1O54908 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm28438-201ENSMUST00000188299 345 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.4□□□□□ -0.1
Dkk1O54908 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Dkk1O54908 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Dkk1O54908 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dkk1O54908 Gm45114-201ENSMUST00000208280 1349 ntBASIC14.4□□□□□ -0.1
Dkk1O54908 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Dkk1O54908 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dkk1O54908 Gm22032-201ENSMUST00000116946 116 ntBASIC14.39□□□□□ -0.11
Dkk1O54908 Gm13836-201ENSMUST00000121159 501 ntBASIC14.39□□□□□ -0.11
Dkk1O54908 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.39□□□□□ -0.11
Dkk1O54908 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dkk1O54908 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.39□□□□□ -0.11
Dkk1O54908 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dkk1O54908 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Dkk1O54908 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.38□□□□□ -0.11
Dkk1O54908 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dkk1O54908 Gm26039-201ENSMUST00000158152 144 ntBASIC14.38□□□□□ -0.11
Dkk1O54908 Gm22697-201ENSMUST00000175194 63 ntBASIC14.38□□□□□ -0.11
Dkk1O54908 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Dkk1O54908 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms