Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm2O35900 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm2O35900 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm2O35900 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm2O35900 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm2O35900 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm2O35900 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lsm2O35900 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Gm27405-201ENSMUST00000184201 112 ntBASIC14.58□□□□□ -0.08
Lsm2O35900 Gm43183-201ENSMUST00000200632 547 ntBASIC14.58□□□□□ -0.08
Lsm2O35900 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.58□□□□□ -0.08
Lsm2O35900 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lsm2O35900 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lsm2O35900 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm2O35900 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm2O35900 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm2O35900 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm2O35900 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Lsm2O35900 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm2O35900 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.57□□□□□ -0.08
Lsm2O35900 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm2O35900 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm2O35900 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.56□□□□□ -0.08
Lsm2O35900 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm2O35900 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lsm2O35900 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.56□□□□□ -0.08
Lsm2O35900 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm2O35900 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.56□□□□□ -0.08
Lsm2O35900 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm2O35900 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm2O35900 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Lsm2O35900 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.55□□□□□ -0.08
Lsm2O35900 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.55□□□□□ -0.08
Lsm2O35900 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm2O35900 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms