Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sptlc1O35704 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sptlc1O35704 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.84■□□□□ 0.45
Sptlc1O35704 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sptlc1O35704 Gm12350-201ENSMUST00000121208 462 ntBASIC17.84■□□□□ 0.45
Sptlc1O35704 Gm36967-201ENSMUST00000193814 266 ntBASIC17.84■□□□□ 0.45
Sptlc1O35704 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.84■□□□□ 0.45
Sptlc1O35704 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.84■□□□□ 0.45
Sptlc1O35704 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sptlc1O35704 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sptlc1O35704 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sptlc1O35704 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sptlc1O35704 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sptlc1O35704 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sptlc1O35704 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Gm1401-201ENSMUST00000122048 772 ntBASIC17.83■□□□□ 0.44
Sptlc1O35704 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.83■□□□□ 0.44
Sptlc1O35704 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.83■□□□□ 0.44
Sptlc1O35704 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.83■□□□□ 0.44
Sptlc1O35704 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.83■□□□□ 0.44
Sptlc1O35704 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Sptlc1O35704 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.83■□□□□ 0.44
Sptlc1O35704 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sptlc1O35704 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.82■□□□□ 0.44
Sptlc1O35704 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.82■□□□□ 0.44
Sptlc1O35704 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Gm5867-201ENSMUST00000063197 592 ntBASIC17.82■□□□□ 0.44
Sptlc1O35704 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.82■□□□□ 0.44
Sptlc1O35704 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sptlc1O35704 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sptlc1O35704 Gm13418-201ENSMUST00000119097 944 ntBASIC17.81■□□□□ 0.44
Sptlc1O35704 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sptlc1O35704 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.81■□□□□ 0.44
Sptlc1O35704 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Gm25990-201ENSMUST00000102440 86 ntBASIC17.8■□□□□ 0.44
Sptlc1O35704 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.8■□□□□ 0.44
Sptlc1O35704 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.8■□□□□ 0.44
Sptlc1O35704 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms