Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Rps4l-201ENSMUST00000071745 943 ntBASIC17.72■□□□□ 0.43
Clk2O35491 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clk2O35491 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clk2O35491 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clk2O35491 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk2O35491 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Clk2O35491 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.71■□□□□ 0.43
Clk2O35491 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.71■□□□□ 0.43
Clk2O35491 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Clk2O35491 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Clk2O35491 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.71■□□□□ 0.43
Clk2O35491 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Clk2O35491 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk2O35491 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
Clk2O35491 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.7■□□□□ 0.42
Clk2O35491 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk2O35491 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Clk2O35491 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.69■□□□□ 0.42
Clk2O35491 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clk2O35491 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Mir6404-201ENSMUST00000183699 94 ntBASIC17.69■□□□□ 0.42
Clk2O35491 Gm7506-201ENSMUST00000207758 815 ntBASIC17.69■□□□□ 0.42
Clk2O35491 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk2O35491 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.68■□□□□ 0.42
Clk2O35491 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.68■□□□□ 0.42
Clk2O35491 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.68■□□□□ 0.42
Clk2O35491 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk2O35491 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.67■□□□□ 0.42
Clk2O35491 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clk2O35491 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Gm25406-201ENSMUST00000157599 105 ntBASIC17.67■□□□□ 0.42
Clk2O35491 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.67■□□□□ 0.42
Clk2O35491 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clk2O35491 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.67■□□□□ 0.42
Clk2O35491 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.67■□□□□ 0.42
Clk2O35491 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk2O35491 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Clk2O35491 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Clk2O35491 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Clk2O35491 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms