Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capn1O35350 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn1O35350 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Capn1O35350 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Capn1O35350 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn1O35350 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn1O35350 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capn1O35350 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.12■□□□□ 0.01
Capn1O35350 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.12■□□□□ 0.01
Capn1O35350 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Capn1O35350 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.12■□□□□ 0.01
Capn1O35350 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capn1O35350 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Capn1O35350 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Capn1O35350 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Capn1O35350 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.11■□□□□ 0.01
Capn1O35350 Gm7153-201ENSMUST00000117092 455 ntBASIC15.11■□□□□ 0.01
Capn1O35350 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.11■□□□□ 0.01
Capn1O35350 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Capn1O35350 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Capn1O35350 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.11■□□□□ 0.01
Capn1O35350 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capn1O35350 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Capn1O35350 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.1■□□□□ 0.01
Capn1O35350 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.1■□□□□ 0.01
Capn1O35350 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Gm13186-201ENSMUST00000118031 316 ntBASIC15.1■□□□□ 0.01
Capn1O35350 Gm15794-201ENSMUST00000120182 631 ntBASIC15.1■□□□□ 0.01
Capn1O35350 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.1■□□□□ 0.01
Capn1O35350 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Capn1O35350 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Capn1O35350 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.1■□□□□ 0.01
Capn1O35350 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Capn1O35350 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Capn1O35350 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Capn1O35350 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.09■□□□□ 0.01
Capn1O35350 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Gm11336-201ENSMUST00000118168 334 ntBASIC15.09■□□□□ 0.01
Capn1O35350 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.09■□□□□ 0.01
Capn1O35350 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.09■□□□□ 0.01
Capn1O35350 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Capn1O35350 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.09■□□□□ 0.01
Capn1O35350 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Capn1O35350 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Capn1O35350 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Capn1O35350 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms