Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Gm4968-201ENSMUST00000071458 858 ntBASIC12.78□□□□□ -0.36
Tnfsf11O35235 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf11O35235 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Tnfsf11O35235 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.77□□□□□ -0.37
Tnfsf11O35235 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.77□□□□□ -0.37
Tnfsf11O35235 Gm4974-201ENSMUST00000209974 875 ntBASIC12.77□□□□□ -0.37
Tnfsf11O35235 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf11O35235 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.76□□□□□ -0.37
Tnfsf11O35235 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms