Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.58□□□□□ -0.08
Alx4O35137 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Alx4O35137 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Alx4O35137 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.58□□□□□ -0.08
Alx4O35137 Timm23-208ENSMUST00000226683 750 ntBASIC14.58□□□□□ -0.08
Alx4O35137 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Alx4O35137 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.58□□□□□ -0.08
Alx4O35137 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx4O35137 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Alx4O35137 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.57□□□□□ -0.08
Alx4O35137 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.57□□□□□ -0.08
Alx4O35137 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Alx4O35137 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.57□□□□□ -0.08
Alx4O35137 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx4O35137 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.57□□□□□ -0.08
Alx4O35137 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.56□□□□□ -0.08
Alx4O35137 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx4O35137 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Alx4O35137 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.56□□□□□ -0.08
Alx4O35137 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Alx4O35137 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.56□□□□□ -0.08
Alx4O35137 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx4O35137 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx4O35137 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Alx4O35137 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.55□□□□□ -0.08
Alx4O35137 Gm36967-201ENSMUST00000193814 266 ntBASIC14.55□□□□□ -0.08
Alx4O35137 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.55□□□□□ -0.08
Alx4O35137 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.55□□□□□ -0.08
Alx4O35137 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.55□□□□□ -0.08
Alx4O35137 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.55□□□□□ -0.08
Alx4O35137 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx4O35137 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.55□□□□□ -0.08
Alx4O35137 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.55□□□□□ -0.08
Alx4O35137 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Alx4O35137 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx4O35137 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Alx4O35137 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx4O35137 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms