Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Raet1aO08602 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.5□□□□□ -0.09
Raet1aO08602 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Raet1aO08602 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Raet1aO08602 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Raet1aO08602 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Raet1aO08602 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.49□□□□□ -0.09
Raet1aO08602 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.49□□□□□ -0.09
Raet1aO08602 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.49□□□□□ -0.09
Raet1aO08602 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Raet1aO08602 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.49□□□□□ -0.09
Raet1aO08602 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Raet1aO08602 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Gm11355-201ENSMUST00000121120 306 ntBASIC14.48□□□□□ -0.09
Raet1aO08602 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.48□□□□□ -0.09
Raet1aO08602 Gm10231-201ENSMUST00000181584 441 ntBASIC14.48□□□□□ -0.09
Raet1aO08602 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.48□□□□□ -0.09
Raet1aO08602 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.48□□□□□ -0.09
Raet1aO08602 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Gm10175-202ENSMUST00000208752 441 ntBASIC14.48□□□□□ -0.09
Raet1aO08602 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.48□□□□□ -0.09
Raet1aO08602 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Raet1aO08602 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.47□□□□□ -0.09
Raet1aO08602 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.47□□□□□ -0.09
Raet1aO08602 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Gm10013-201ENSMUST00000106074 672 ntBASIC14.47□□□□□ -0.09
Raet1aO08602 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.47□□□□□ -0.09
Raet1aO08602 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.47□□□□□ -0.09
Raet1aO08602 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Raet1aO08602 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.47□□□□□ -0.09
Raet1aO08602 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Raet1aO08602 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Raet1aO08602 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.47□□□□□ -0.09
Raet1aO08602 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms