Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 App-207ENSMUST00000227737 2827 ntBASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shisa8J3QNX5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shisa8J3QNX5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shisa8J3QNX5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Gm12085-201ENSMUST00000119263 940 ntBASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms