Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
E030018B13RikJ3QMS9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
E030018B13RikJ3QMS9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
E030018B13RikJ3QMS9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.15□□□□□ -0.31
E030018B13RikJ3QMS9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.15□□□□□ -0.31
E030018B13RikJ3QMS9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
E030018B13RikJ3QMS9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
E030018B13RikJ3QMS9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gm9103-201ENSMUST00000119371 405 ntBASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
E030018B13RikJ3QMS9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
E030018B13RikJ3QMS9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms