Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-3J3QMG8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Mir770-201ENSMUST00000103252 94 ntBASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-3J3QMG8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gm13836-201ENSMUST00000121159 501 ntBASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gm9013-201ENSMUST00000132939 882 ntBASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-3J3QMG8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-3J3QMG8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms