Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Gm6433-201ENSMUST00000118634 875 ntBASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Chrna9G3X8Z7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Gm18032-201ENSMUST00000222541 538 ntBASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chrna9G3X8Z7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chrna9G3X8Z7 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms