Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.6■□□□□ 0.73
NpcdF8VQB8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NpcdF8VQB8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NpcdF8VQB8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.59■□□□□ 0.73
NpcdF8VQB8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Gm8655-201ENSMUST00000221159 852 ntBASIC19.59■□□□□ 0.73
NpcdF8VQB8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NpcdF8VQB8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.58■□□□□ 0.73
NpcdF8VQB8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Gm27321-201ENSMUST00000185021 205 ntBASIC19.58■□□□□ 0.72
NpcdF8VQB8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.58■□□□□ 0.72
NpcdF8VQB8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.58■□□□□ 0.72
NpcdF8VQB8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NpcdF8VQB8 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.57■□□□□ 0.72
NpcdF8VQB8 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.57■□□□□ 0.72
NpcdF8VQB8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.57■□□□□ 0.72
NpcdF8VQB8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NpcdF8VQB8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Gm4459-201ENSMUST00000118750 468 ntBASIC19.56■□□□□ 0.72
NpcdF8VQB8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms