Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Gm16061-201ENSMUST00000122167 857 ntBASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Gm18421-201ENSMUST00000204122 625 ntBASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh9F8VPK8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh9F8VPK8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Gm13474-201ENSMUST00000122466 815 ntBASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh9F8VPK8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms