Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Gm7791-201ENSMUST00000219066 539 ntBASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh1F7BJK1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh1F7BJK1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh1F7BJK1 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.71□□□□□ -0.06
Pcdh1F7BJK1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh1F7BJK1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Asic1-205ENSMUST00000228185 1818 ntBASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh1F7BJK1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh1F7BJK1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms