Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh11xF6ZNL5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh11xF6ZNL5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh11xF6ZNL5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh11xF6ZNL5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Gm10819-201ENSMUST00000099988 561 ntBASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Dancr-204ENSMUST00000132389 2347 ntBASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms