Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Gm6296-201ENSMUST00000222599 943 ntBASIC16.54■□□□□ 0.24
Ccdc149F6V035 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Ccdc149F6V035 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Gm7862-201ENSMUST00000121461 292 ntBASIC16.53■□□□□ 0.24
Ccdc149F6V035 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.53■□□□□ 0.24
Ccdc149F6V035 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc149F6V035 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.52■□□□□ 0.24
Ccdc149F6V035 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc149F6V035 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc149F6V035 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc149F6V035 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc149F6V035 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.52■□□□□ 0.23
Ccdc149F6V035 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.51■□□□□ 0.23
Ccdc149F6V035 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc149F6V035 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccdc149F6V035 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc149F6V035 Gm44357-201ENSMUST00000195897 142 ntBASIC16.5■□□□□ 0.23
Ccdc149F6V035 Gm19658-201ENSMUST00000196231 138 ntBASIC16.5■□□□□ 0.23
Ccdc149F6V035 Gm44367-201ENSMUST00000196836 138 ntBASIC16.5■□□□□ 0.23
Ccdc149F6V035 Gm44350-201ENSMUST00000197197 138 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms