Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf4lE9Q2N0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4lE9Q2N0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4lE9Q2N0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4lE9Q2N0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm10052-201ENSMUST00000168019 960 ntBASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm44430-201ENSMUST00000203376 995 ntBASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm45328-201ENSMUST00000210942 917 ntBASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm7729-201ENSMUST00000050143 801 ntBASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4lE9Q2N0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4lE9Q2N0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4lE9Q2N0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms