Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm28043E0CXC2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm28043E0CXC2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm28043E0CXC2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Gm28043E0CXC2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm28043E0CXC2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms