Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm12887B1AVM1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm12887B1AVM1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm12887B1AVM1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Gm24841-201ENSMUST00000158676 357 ntBASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm12887B1AVM1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Gm13148-201ENSMUST00000118892 745 ntBASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Gm17661-201ENSMUST00000170317 270 ntBASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Gm27000-201ENSMUST00000182943 842 ntBASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms