Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sh2d4bA6X942 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh2d4bA6X942 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh2d4bA6X942 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d4bA6X942 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d4bA6X942 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d4bA6X942 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.42■□□□□ 0.38
Sh2d4bA6X942 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.42■□□□□ 0.38
Sh2d4bA6X942 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh2d4bA6X942 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms