Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Gm24841-201ENSMUST00000158676 357 ntBASIC16.62■□□□□ 0.25
Gm5640A3KG49 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Gm27405-201ENSMUST00000184201 112 ntBASIC16.62■□□□□ 0.25
Gm5640A3KG49 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.62■□□□□ 0.25
Gm5640A3KG49 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.62■□□□□ 0.25
Gm5640A3KG49 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5640A3KG49 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Gm5640A3KG49 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm5640A3KG49 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5640A3KG49 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.59■□□□□ 0.25
Gm5640A3KG49 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Gm4968-201ENSMUST00000071458 858 ntBASIC16.59■□□□□ 0.25
Gm5640A3KG49 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.59■□□□□ 0.25
Gm5640A3KG49 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5640A3KG49 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm5640A3KG49 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5640A3KG49 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Gm27000-201ENSMUST00000182943 842 ntBASIC16.58■□□□□ 0.24
Gm5640A3KG49 Gm37025-201ENSMUST00000195159 829 ntBASIC16.58■□□□□ 0.24
Gm5640A3KG49 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms