Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm24755-201ENSMUST00000179691 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm26506-201ENSMUST00000179692 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm25086-201ENSMUST00000179931 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm23243-201ENSMUST00000180047 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm24659-201ENSMUST00000180212 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm24169-201ENSMUST00000180244 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm23689-201ENSMUST00000180354 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm27359-201ENSMUST00000184153 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm27785-201ENSMUST00000184268 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm27466-201ENSMUST00000184396 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm27703-201ENSMUST00000184836 110 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm45331-201ENSMUST00000209868 554 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.22□□□□□ -0.29
Chd6A3KFM7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd6A3KFM7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.21□□□□□ -0.29
Chd6A3KFM7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.21□□□□□ -0.29
Chd6A3KFM7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.21□□□□□ -0.29
Chd6A3KFM7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.21□□□□□ -0.29
Chd6A3KFM7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd6A3KFM7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd6A3KFM7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm25287-201ENSMUST00000103846 110 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm22918-201ENSMUST00000103855 110 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm27989-201ENSMUST00000184721 107 ntBASIC13.2□□□□□ -0.3
Chd6A3KFM7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd6A3KFM7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd6A3KFM7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm15824-201ENSMUST00000119516 955 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm10253-201ENSMUST00000194270 940 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms