Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.73□□□□□ -0.21
Col6a4A2AX52 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm14701-201ENSMUST00000117156 348 ntBASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm13418-201ENSMUST00000119097 944 ntBASIC13.73□□□□□ -0.21
Col6a4A2AX52 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm27397-201ENSMUST00000184997 107 ntBASIC13.73□□□□□ -0.21
Col6a4A2AX52 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a4A2AX52 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.72□□□□□ -0.21
Col6a4A2AX52 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.72□□□□□ -0.21
Col6a4A2AX52 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 AV026068-213ENSMUST00000223675 1171 ntBASIC13.72□□□□□ -0.21
Col6a4A2AX52 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a4A2AX52 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.71□□□□□ -0.21
Col6a4A2AX52 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a4A2AX52 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.71□□□□□ -0.21
Col6a4A2AX52 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a4A2AX52 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm26308-201ENSMUST00000157768 69 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms