Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv17A0A140T8P8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.53□□□□□ -0.4
Trbv17A0A140T8P8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.52□□□□□ -0.4
Trbv17A0A140T8P8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.52□□□□□ -0.41
Trbv17A0A140T8P8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm22697-201ENSMUST00000175194 63 ntBASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm27389-201ENSMUST00000183622 195 ntBASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm10566-201ENSMUST00000086739 996 ntBASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms