Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav23A0A0G2JG17 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav23A0A0G2JG17 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav23A0A0G2JG17 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav23A0A0G2JG17 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav23A0A0G2JG17 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Gm6659-201ENSMUST00000174752 547 ntBASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Gm23634-201ENSMUST00000175071 91 ntBASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.43□□□□□ -0.26
Trav23A0A0G2JG17 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gm26039-201ENSMUST00000158152 144 ntBASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav23A0A0G2JG17 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 AA414768-201ENSMUST00000121924 1257 ntBASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav23A0A0G2JG17 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav23A0A0G2JG17 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav23A0A0G2JG17 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav23A0A0G2JG17 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav23A0A0G2JG17 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms