Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm27000-201ENSMUST00000182943 842 ntBASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm37856-201ENSMUST00000191634 999 ntBASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sybu-209ENSMUST00000228639 4113 ntBASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm18958-201ENSMUST00000174258 762 ntBASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms