Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Mir1199-201ENSMUST00000117015 119 ntBASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7-1A0A0G2JEV5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Timm23-208ENSMUST00000226683 750 ntBASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7-1A0A0G2JEV5 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7-1A0A0G2JEV5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms