Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-2A0A0G2JDP3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.9□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9n-2A0A0G2JDP3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms