Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav19A0A0B4J1K4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav19A0A0B4J1K4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav19A0A0B4J1K4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav19A0A0B4J1K4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms