Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav9-4A0A0B4J1K2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm25016-201ENSMUST00000158399 131 ntBASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9-4A0A0B4J1K2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm6345-202ENSMUST00000180900 204 ntBASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms