Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4-3A0A0B4J1K1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm5408-201ENSMUST00000197998 747 ntBASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4-3A0A0B4J1K1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4-3A0A0B4J1K1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms