Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv16A0A0B4J1H3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv16A0A0B4J1H3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv16A0A0B4J1H3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms