Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm45328-201ENSMUST00000210942 917 ntBASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh7A0A0A6YY83 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh7A0A0A6YY83 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh7A0A0A6YY83 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh7A0A0A6YY83 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms