Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-47A0A0A6YY41 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm16061-201ENSMUST00000122167 857 ntBASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm11539-201ENSMUST00000119837 557 ntBASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm13436-201ENSMUST00000120418 567 ntBASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-47A0A0A6YY41 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms