Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm37025-201ENSMUST00000195159 829 ntBASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gm17661-201ENSMUST00000170317 270 ntBASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms