Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6-5A0A075B6B5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Gm37025-201ENSMUST00000195159 829 ntBASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-5A0A075B6B5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-5A0A075B6B5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gm24841-201ENSMUST00000158676 357 ntBASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gm27000-201ENSMUST00000182943 842 ntBASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gm26524-201ENSMUST00000192339 390 ntBASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-5A0A075B6B5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms