Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-1A0A075B699 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Gm10812-201ENSMUST00000099864 546 ntBASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-1A0A075B699 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-1A0A075B699 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms