Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13-2A0A075B649 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm11249-201ENSMUST00000117071 859 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm27405-201ENSMUST00000184201 112 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm18025-201ENSMUST00000221733 862 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-2A0A075B649 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gm12382-201ENSMUST00000122005 922 ntBASIC11□□□□□ -0.65
Trav13-2A0A075B649 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gm10517-202ENSMUST00000192970 758 ntBASIC11□□□□□ -0.65
Trav13-2A0A075B649 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-2A0A075B649 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms