Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-3A0A075B648 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Gm12251-201ENSMUST00000117893 792 ntBASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12-3A0A075B648 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gm13534-201ENSMUST00000121169 513 ntBASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12-3A0A075B648 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms