Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RHBDD3Q9Y3P4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RHBDD3Q9Y3P4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL353743.1-202ENST00000431724 1695 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RNA5SP354-201ENST00000391247 136 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 BX682237.1-201ENST00000415016 335 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 MTCYBP32-201ENST00000427945 1084 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 MTCYBP15-201ENST00000433123 1127 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC092573.2-201ENST00000434546 243 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 MTND4P15-201ENST00000437913 1033 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 MOB1AP2-201ENST00000446060 614 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL358232.1-201ENST00000448030 501 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 PNPLA4P1-201ENST00000458328 305 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RPL7P23-201ENST00000493874 747 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL035413.2-201ENST00000604801 525 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AC026741.1-201ENST00000605892 482 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL627309.6-201ENST00000606857 840 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 AL118556.2-201ENST00000614375 824 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 VN1R7P-201ENST00000619242 903 ntBASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.63□□□□□ -1.99
RHBDD3Q9Y3P4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MIR135A2-201ENST00000384854 100 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MIR34B-201ENST00000385076 84 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RNA5SP171-201ENST00000391071 115 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RPL7P25-201ENST00000404151 721 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL590004.2-201ENST00000404787 371 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL356131.1-201ENST00000405826 414 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RNU2-47P-201ENST00000410649 186 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 BMS1P22-201ENST00000414726 313 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL139281.1-201ENST00000422120 335 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC019178.2-201ENST00000423595 505 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL365496.1-201ENST00000426885 215 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 ARPC3P1-201ENST00000437218 533 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 VN1R10P-201ENST00000447106 875 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RPS17P11-201ENST00000474297 293 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RN7SL504P-201ENST00000494496 287 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC113420.1-201ENST00000507903 571 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 RNU6-798P-201ENST00000516912 103 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC103783.1-201ENST00000520506 373 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 OR8K2P-201ENST00000524645 927 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC090695.1-201ENST00000561269 1222 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AL136363.1-201ENST00000605349 337 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AP000238.1-201ENST00000608759 426 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AP005137.2-201ENST00000609238 400 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC069200.1-201ENST00000609511 323 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC007318.2-201ENST00000620999 243 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 AC026422.1-201ENST00000623961 452 ntBASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.62□□□□□ -1.99
RHBDD3Q9Y3P4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHBDD3Q9Y3P4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms