Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 RPS3AP4-201ENST00000555161 764 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 MIR4303-201ENST00000581299 66 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 AC007687.1-201ENST00000602704 304 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 HMGN2P28-201ENST00000606102 262 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 AL627390.1-201ENST00000396055 340 ntBASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 FNDC3CP-201ENST00000420795 1155 ntBASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 AL445685.2-201ENST00000422551 342 ntBASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 RPS7P5-201ENST00000441482 581 ntBASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 SNRPGP19-201ENST00000603826 189 ntBASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.84□□□□□ -1.95
SHANK2Q9UPX8 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 RPL23AP58-201ENST00000440453 469 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AC243772.1-201ENST00000451620 410 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 TVP23BP2-201ENST00000455082 615 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AC090543.1-201ENST00000492168 485 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 PSMA6P4-201ENST00000603247 718 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 BX248123.2-201ENST00000606318 124 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AC116447.1-201ENST00000613153 453 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 AC010678.1-201ENST00000614118 713 ntBASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.84□□□□□ -1.96
SHANK2Q9UPX8 NR1H5P-201ENST00000452683 1377 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 METTL21EP-201ENST00000298105 713 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 RNU6-707P-201ENST00000364647 95 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AL021397.1-201ENST00000451806 248 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AL109741.2-201ENST00000455561 343 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 RNU6-717P-201ENST00000459076 104 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 MTND4LP22-201ENST00000508209 276 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 MIR6504-201ENST00000613520 61 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AL589994.2-201ENST00000621124 579 ntBASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.83□□□□□ -1.96
SHANK2Q9UPX8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 MIRLET7G-201ENST00000362280 84 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 SNORD114-26-201ENST00000363543 72 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 RNA5SP160-201ENST00000364866 120 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 RNU6-146P-201ENST00000384602 108 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 MIR613-201ENST00000385248 95 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 RNU2-68P-201ENST00000410878 191 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AC104564.1-201ENST00000493028 407 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 FABP5P6-201ENST00000510588 409 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AC084768.2-201ENST00000622736 221 ntBASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
SHANK2Q9UPX8 AL118496.1-201ENST00000440201 1812 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 RNU1-57P-201ENST00000384491 166 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 MIR1294-201ENST00000408503 142 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AC092638.1-201ENST00000411966 1275 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 HMGB3P10-201ENST00000434734 572 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 SNORA25.15-201ENST00000516487 89 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AC068790.3-201ENST00000602988 553 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 AL121917.1-203ENST00000605534 577 ntBASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.81□□□□□ -1.96
SHANK2Q9UPX8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 RPL5P19-201ENST00000404228 893 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 RNA5SP338-201ENST00000410495 85 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC027124.2-201ENST00000428249 105 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC022431.1-201ENST00000450941 438 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC067805.1-201ENST00000559344 470 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 DUXAP3-201ENST00000603616 594 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 RPL23AP88-201ENST00000605759 454 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 AC012321.1-201ENST00000561622 1588 ntBASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHANK2Q9UPX8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms