Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL049780.3-201ENST00000624612 1583 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AL365361.1-201ENST00000566942 3481 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 ENSAP3-201ENST00000312710 333 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 RNA5SP68-201ENST00000363885 119 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 CYCSP45-201ENST00000402289 315 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC096533.1-201ENST00000411645 353 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC073310.1-201ENST00000423226 1033 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 FCF1P1-201ENST00000432690 571 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 FABP5P3-201ENST00000437960 408 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC005002.1-201ENST00000447458 540 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC104073.1-201ENST00000451988 151 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC010099.1-201ENST00000455434 375 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC027673.1-201ENST00000456245 405 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 RPL36AP51-201ENST00000487216 318 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 RPS27P23-201ENST00000487608 251 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC087272.1-201ENST00000523624 533 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 UBTFL10-201ENST00000528532 562 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 MED28P6-201ENST00000558776 231 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC061975.8-201ENST00000587058 721 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 DUXAP3-201ENST00000603616 594 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC111188.2-201ENST00000529697 1387 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS29Q9UBQ0 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 FRG1BP-201ENST00000278882 761 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 RNU6-1339P-201ENST00000363574 91 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 RNU6-730P-201ENST00000383954 104 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 ARF4P3-201ENST00000397387 509 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 MTCO1P57-201ENST00000432182 261 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AL831737.1-201ENST00000441288 271 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 RPL37P25-201ENST00000507308 276 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC112673.1-201ENST00000513168 575 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AP003467.2-201ENST00000520175 319 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC027104.1-201ENST00000563702 681 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC022069.1-201ENST00000582910 658 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AL645944.1-201ENST00000603857 493 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC024560.3-201ENST00000608482 349 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AC068722.2-201ENST00000618734 544 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AL513185.3-201ENST00000433335 1300 ntBASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS29Q9UBQ0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 SNORA5B-201ENST00000363786 132 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 SNORA27.3-201ENST00000364937 134 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AL035410.1-201ENST00000427409 427 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 SUMO1P4-201ENST00000429430 302 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC092427.1-202ENST00000430569 476 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 EZH2P1-201ENST00000431167 291 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 OR6K5P-201ENST00000447050 945 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC004924.1-201ENST00000480160 781 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms