Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SNORD96B-201ENST00000386148 79 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RNA5SP372-201ENST00000390836 115 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RNU6-278P-201ENST00000390945 109 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RPL23AP32-201ENST00000395315 459 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RNU2-62P-201ENST00000410868 191 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 ELOCP17-201ENST00000414751 326 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC019097.1-201ENST00000424783 735 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC093156.1-201ENST00000440382 670 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 ATP5C1P1-201ENST00000441945 895 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC008481.1-201ENST00000463278 396 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 MTCO2P29-201ENST00000465212 189 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 NDUFB4P2-201ENST00000509515 391 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 MTND4LP31-201ENST00000514859 294 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RNA5SP49-201ENST00000516450 115 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL391156.1-201ENST00000554965 554 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC025884.1-201ENST00000556034 378 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 RPL21P7-201ENST00000557463 483 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC034105.4-201ENST00000568304 277 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 DUXAP4-201ENST00000603046 613 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL160290.3-201ENST00000604869 165 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 Z98200.1-201ENST00000607298 470 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AP002360.3-201ENST00000607673 710 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AP000254.1-201ENST00000609934 520 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC026368.1-201ENST00000614934 690 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC138932.5-201ENST00000617759 563 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.96□□□□□ -1.77
LRFN1Q9P244 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
LRFN1Q9P244 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.96□□□□□ -1.77
LRFN1Q9P244 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 RNY3P13-201ENST00000365542 102 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN1Q9P244 RPL7P60-201ENST00000397636 735 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC110754.1-201ENST00000399740 601 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL022722.2-201ENST00000402519 180 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 SNORA74C-2-201ENST00000411179 201 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RNA5SP107-201ENST00000411358 122 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RPL21P24-201ENST00000413752 448 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 RPS24P1-201ENST00000438550 371 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RABEPKP1-201ENST00000440529 1026 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 RPS7P7-201ENST00000463499 571 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RPL9P32-201ENST00000464118 620 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RN7SL691P-201ENST00000494487 301 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 CDC42P4-201ENST00000510507 563 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 SNORA18.6-201ENST00000516792 115 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 RNU6-64P-201ENST00000517119 105 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 OR4H12P-201ENST00000556269 907 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC137800.2-201ENST00000574375 120 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 NRBF2P1-201ENST00000587407 859 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL354984.3-201ENST00000604803 325 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC008277.2-201ENST00000605196 797 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC103591.3-201ENST00000608684 209 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC104073.3-201ENST00000610942 955 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC004696.1-201ENST00000614345 607 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 uc_338.32-201ENST00000615087 172 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 MIR8059-201ENST00000620427 81 ntBASIC3.96□□□□□ -1.78
LRFN1Q9P244 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.96□□□□□ -1.78
LRFN1Q9P244 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms