Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC009127.3-201ENST00000570531 403 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RPL23AP84-201ENST00000571193 464 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 MIR3609-201ENST00000582661 80 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 OR1M4P-201ENST00000589199 287 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC009090.3-201ENST00000616553 565 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC098657.3-201ENST00000620434 263 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL031601.2-202ENST00000622650 282 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL049780.3-201ENST00000624612 1583 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL356118.1-201ENST00000635272 1078 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL359851.1-201ENST00000569460 4997 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC123912.3-201ENST00000600907 1367 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 SNORD62.1-201ENST00000362541 86 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AP002784.2-201ENST00000397300 549 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL136372.1-201ENST00000403060 228 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC096664.2-201ENST00000411843 406 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 RNF2P1-201ENST00000442955 1010 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 SNRPGP6-201ENST00000451124 220 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC078857.1-201ENST00000469870 667 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 HIGD1AP13-201ENST00000509878 289 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 HMGB1P47-201ENST00000511281 589 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 RNA5SP24-201ENST00000516478 95 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC100870.1-201ENST00000522035 505 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL451007.1-201ENST00000595491 289 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC018618.2-201ENST00000604770 446 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC079610.2-201ENST00000604818 690 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL136363.1-201ENST00000605349 337 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC004775.1-201ENST00000607389 753 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AP004247.3-201ENST00000608682 624 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL353748.2-201ENST00000622148 471 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AC009902.3-201ENST00000606235 2172 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.52□□□□□ -2.17
LIMD2Q9BT23 AL365361.1-201ENST00000566942 3481 ntBASIC1.52□□□□□ -2.17
LIMD2Q9BT23 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MTND4P1-201ENST00000457501 1466 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 SDAD1P2-201ENST00000441308 2028 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RNU6-1074P-201ENST00000383995 104 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 SNORA6-201ENST00000384033 151 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RNU6-441P-201ENST00000384545 106 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 SNORA44-201ENST00000384584 132 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RNU6-1151P-201ENST00000384684 107 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 Z86062.1-201ENST00000406773 777 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RPLP0P7-201ENST00000416050 667 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC019097.1-201ENST00000424783 735 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MTND2P19-201ENST00000449129 1012 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC092798.1-201ENST00000458542 409 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 S100A11P2-201ENST00000467589 312 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RPS29P26-201ENST00000477483 171 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC008427.1-201ENST00000503102 655 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 MLLT10P2-201ENST00000506434 249 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RNA5SP282-201ENST00000516355 108 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 COX6CP8-201ENST00000522620 226 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AP000867.2-201ENST00000532468 320 ntBASIC1.51□□□□□ -2.17
LIMD2Q9BT23 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMD2Q9BT23 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms