Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 SAR1AP4-201ENST00000429225 591 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC105272.1-201ENST00000438604 198 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AL513043.1-201ENST00000439124 535 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AL645638.1-201ENST00000440519 361 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC025750.2-201ENST00000442609 450 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 OR6K1P-201ENST00000456766 971 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AL031183.1-201ENST00000457667 207 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 RPL21P39-201ENST00000463605 483 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC011979.1-201ENST00000472300 483 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 RPL21P93-201ENST00000480465 489 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC233702.1-201ENST00000482905 502 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC087190.1-201ENST00000484462 480 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC093591.1-201ENST00000491435 481 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 RPL21P16-201ENST00000495531 483 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC008628.1-201ENST00000508663 265 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AP001317.1-201ENST00000531194 960 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 ELOCP29-201ENST00000588193 334 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AP005137.2-201ENST00000609238 400 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC009570.1-201ENST00000609599 745 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 MIR6076-201ENST00000617521 113 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 AC006249.1-201ENST00000621223 471 ntBASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.82□□□□□ -1.96
ECHDC3Q96DC8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 CUL1P1-201ENST00000509510 2425 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RNU6-7-201ENST00000364784 107 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RNU6-8-201ENST00000365467 107 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AL122016.1-201ENST00000403365 367 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC092638.1-201ENST00000411966 1275 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC087499.2-201ENST00000432861 149 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AL831737.1-201ENST00000441288 271 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 KLRA1P-201ENST00000503499 986 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RN7SKP132-201ENST00000516001 208 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RNU6-27P-201ENST00000516146 107 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 RNU6-1095P-201ENST00000516148 108 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC104986.1-201ENST00000517978 436 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 HPRT1P3-201ENST00000539521 576 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC055876.5-201ENST00000605667 259 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 MIR7106-201ENST00000612419 65 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 VN1R74P-201ENST00000613259 503 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC078880.5-201ENST00000617845 421 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AP000676.4-201ENST00000624659 623 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC091925.2-201ENST00000625059 256 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AC011460.1-201ENST00000636268 1834 ntBASIC2.81□□□□□ -1.96
ECHDC3Q96DC8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 GDI2P1-201ENST00000429312 1336 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 RNU5B-1-201ENST00000363286 116 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 RNU6-799P-201ENST00000363567 107 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 SNORD51-201ENST00000384320 80 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 ARF4P3-201ENST00000397387 509 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 BOLA3P4-201ENST00000418151 400 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 MTCO1P39-201ENST00000426148 480 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 MTCYBP32-201ENST00000427945 1084 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC012497.1-201ENST00000429392 575 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 MTCYBP15-201ENST00000433123 1127 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 RPL23AP58-201ENST00000440453 469 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 COX6CP2-201ENST00000444980 225 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AP001486.1-201ENST00000463339 476 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AL049873.1-201ENST00000480540 376 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 OR10V3P-201ENST00000525712 725 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AP003168.1-201ENST00000530091 307 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms