Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 MIR3935-201ENST00000583472 104 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AL353997.5-201ENST00000618886 171 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 DUXAP9-208ENST00000622815 614 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AC090617.7-201ENST00000623952 126 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 Z82195.2-201ENST00000612348 18351 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AC091564.4-201ENST00000533934 2194 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 SNORA16.1-201ENST00000364597 132 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 RNU4-7P-201ENST00000364758 141 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 SNORA51.11-201ENST00000384442 131 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AL589994.1-201ENST00000404962 340 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC109583.1-201ENST00000432156 268 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC090453.1-201ENST00000495560 436 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AL356280.1-201ENST00000603614 379 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AP000942.3-201ENST00000603702 160 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 VN1R74P-201ENST00000613259 503 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 AC104307.1-201ENST00000616142 196 ntBASIC2.79□□□□□ -1.96
VPS8Q8N3P4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS8Q8N3P4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AC113368.1-201ENST00000603736 382 ntBASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AC091953.2-201ENST00000623979 160 ntBASIC2.78□□□□□ -1.96
VPS8Q8N3P4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS8Q8N3P4 MTND4P34-201ENST00000572715 1371 ntBASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AL157700.1-201ENST00000561973 1432 ntBASIC2.78□□□□□ -1.96
VPS8Q8N3P4 AL161781.1-201ENST00000354277 403 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC023128.2-201ENST00000420880 1223 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC233279.1-201ENST00000455300 423 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AP000926.3-201ENST00000497201 299 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC010627.1-201ENST00000503819 1294 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC011352.3-201ENST00000505162 593 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS8Q8N3P4 CBX3P4-201ENST00000538909 354 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC090751.1-201ENST00000566966 267 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS8Q8N3P4 KATNBL1P1-201ENST00000605192 748 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
VPS8Q8N3P4 HSPE1P11-201ENST00000339579 310 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 snoZ278.1-201ENST00000517059 112 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AP003117.2-201ENST00000606010 545 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 SNORD48-201ENST00000364953 64 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 ATP5F1P6-201ENST00000402768 767 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 HSPE1P1-201ENST00000421494 318 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 HMGB1P1-201ENST00000522557 636 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AF279873.1-201ENST00000523393 313 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 FAM106CP-201ENST00000582212 507 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 RNA5SP108-201ENST00000605921 117 ntBASIC2.76□□□□□ -1.97
VPS8Q8N3P4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS8Q8N3P4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 SNORD13-201ENST00000459299 104 ntBASIC2.75□□□□□ -1.97
VPS8Q8N3P4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS8Q8N3P4 AL136164.4-201ENST00000625013 2135 ntBASIC2.74□□□□□ -1.97
VPS8Q8N3P4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms