Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
TPM4P67936 NDUFB4P6-201ENST00000436819 366 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM4P67936 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM4P67936 AC104978.1-201ENST00000449387 391 ntBASIC2.7□□□□□ -1.98
TPM4P67936 RPS20P24-201ENST00000457473 361 ntBASIC2.7□□□□□ -1.98
TPM4P67936 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.7□□□□□ -1.98
TPM4P67936 VPS26AP1-201ENST00000483197 979 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AC008716.1-201ENST00000511084 513 ntBASIC2.7□□□□□ -1.98
TPM4P67936 SNORA70.16-201ENST00000516390 95 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM4P67936 OR4R1P-201ENST00000529879 463 ntBASIC2.7□□□□□ -1.98
TPM4P67936 OR4R2P-201ENST00000530815 597 ntBASIC2.7□□□□□ -1.98
TPM4P67936 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM4P67936 AC090616.3-201ENST00000582184 217 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AP004247.3-201ENST00000608682 624 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AC092608.2-201ENST00000624427 218 ntBASIC2.7□□□□□ -1.98
TPM4P67936 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TPM4P67936 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TPM4P67936 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TPM4P67936 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.69□□□□□ -1.98
TPM4P67936 AC010680.1-201ENST00000590024 3590 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AC008669.1-201ENST00000565823 2178 ntBASIC2.69□□□□□ -1.98
TPM4P67936 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TPM4P67936 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TPM4P67936 MIR21-201ENST00000362134 72 ntBASIC2.69□□□□□ -1.98
TPM4P67936 SNORA44-201ENST00000384584 132 ntBASIC2.69□□□□□ -1.98
TPM4P67936 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
TPM4P67936 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TPM4P67936 SNORA11B-201ENST00000408175 129 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM4P67936 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
TPM4P67936 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.69□□□□□ -1.98
TPM4P67936 ATP5F1P1-201ENST00000433775 569 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM4P67936 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM4P67936 RPL23AP70-201ENST00000483361 460 ntBASIC2.69□□□□□ -1.98
TPM4P67936 OR9N1P-202ENST00000494289 481 ntBASIC2.69□□□□□ -1.98
TPM4P67936 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.69□□□□□ -1.98
TPM4P67936 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.69□□□□□ -1.98
TPM4P67936 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 AC074051.3-201ENST00000570238 358 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.69□□□□□ -1.98
TPM4P67936 AC009163.5-201ENST00000575421 637 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AC103810.1-201ENST00000579873 453 ntBASIC2.69□□□□□ -1.98
TPM4P67936 AC007619.2-201ENST00000605743 379 ntBASIC2.69□□□□□ -1.98
TPM4P67936 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.69□□□□□ -1.98
TPM4P67936 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
TPM4P67936 RNU6-173P-201ENST00000364215 104 ntBASIC2.68□□□□□ -1.98
TPM4P67936 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
TPM4P67936 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TPM4P67936 AL139039.1-201ENST00000401900 692 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC004866.2-201ENST00000438285 481 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC105272.1-201ENST00000438604 198 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.68□□□□□ -1.98
TPM4P67936 AL031659.1-201ENST00000447075 539 ntBASIC2.68□□□□□ -1.98
TPM4P67936 BX248409.1-201ENST00000455497 255 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC135721.1-201ENST00000497954 479 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.68□□□□□ -1.98
TPM4P67936 OR5BM1P-201ENST00000512021 366 ntBASIC2.68□□□□□ -1.98
TPM4P67936 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.68□□□□□ -1.98
TPM4P67936 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.68□□□□□ -1.98
TPM4P67936 AC061975.8-201ENST00000587058 721 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC055876.5-201ENST00000605667 259 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC067747.1-201ENST00000608026 250 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC245517.5-201ENST00000611529 162 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC034102.8-201ENST00000615146 484 ntBASIC2.68□□□□□ -1.98
TPM4P67936 FRG1HP-204ENST00000617940 757 ntBASIC2.68□□□□□ -1.98
TPM4P67936 AC027309.3-201ENST00000623419 351 ntBASIC2.68□□□□□ -1.98
TPM4P67936 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM4P67936 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TPM4P67936 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM4P67936 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TPM4P67936 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TPM4P67936 TATDN1P1-201ENST00000414123 891 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM4P67936 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
TPM4P67936 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.67□□□□□ -1.98
TPM4P67936 RNF2P1-201ENST00000442955 1010 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM4P67936 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
TPM4P67936 NAMPTP2-201ENST00000505629 1115 ntBASIC2.67□□□□□ -1.98
TPM4P67936 RN7SKP24-201ENST00000515888 284 ntBASIC2.67□□□□□ -1.98
TPM4P67936 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.67□□□□□ -1.98
TPM4P67936 AC007115.1-201ENST00000546853 234 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AC025281.1-201ENST00000567026 265 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AC105137.2-201ENST00000569073 466 ntBASIC2.67□□□□□ -1.98
TPM4P67936 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.67□□□□□ -1.98
TPM4P67936 MIR4444-1-201ENST00000581696 74 ntBASIC2.67□□□□□ -1.98
TPM4P67936 MIR4444-2-201ENST00000584390 74 ntBASIC2.67□□□□□ -1.98
TPM4P67936 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms