Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
BDNFP23560 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BDNFP23560 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BDNFP23560 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BDNFP23560 RNU5E-8P-201ENST00000363502 116 ntBASIC3.87□□□□□ -1.79
BDNFP23560 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BDNFP23560 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
BDNFP23560 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.87□□□□□ -1.79
BDNFP23560 MTCO2P23-201ENST00000425216 680 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AL365396.1-201ENST00000430854 671 ntBASIC3.87□□□□□ -1.79
BDNFP23560 HMGN2P31-201ENST00000432430 273 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AL512844.2-201ENST00000433990 593 ntBASIC3.87□□□□□ -1.79
BDNFP23560 COX7BP2-201ENST00000437976 242 ntBASIC3.87□□□□□ -1.79
BDNFP23560 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.87□□□□□ -1.79
BDNFP23560 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.87□□□□□ -1.79
BDNFP23560 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.87□□□□□ -1.79
BDNFP23560 RPS20P20-201ENST00000460498 340 ntBASIC3.87□□□□□ -1.79
BDNFP23560 MTND4LP3-201ENST00000468320 276 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
BDNFP23560 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 AC004069.2-201ENST00000505438 1114 ntBASIC3.87□□□□□ -1.79
BDNFP23560 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.87□□□□□ -1.79
BDNFP23560 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.87□□□□□ -1.79
BDNFP23560 AP003497.1-201ENST00000528472 562 ntBASIC3.87□□□□□ -1.79
BDNFP23560 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 UBE2NP1-201ENST00000545592 458 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.87□□□□□ -1.79
BDNFP23560 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 MIR3922-201ENST00000585192 84 ntBASIC3.87□□□□□ -1.79
BDNFP23560 BNIP3P33-201ENST00000598912 569 ntBASIC3.87□□□□□ -1.79
BDNFP23560 AC068313.1-201ENST00000604028 1008 ntBASIC3.87□□□□□ -1.79
BDNFP23560 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.87□□□□□ -1.79
BDNFP23560 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
BDNFP23560 AC007496.3-201ENST00000624987 3443 ntBASIC3.86□□□□□ -1.79
BDNFP23560 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 AL049641.1-201ENST00000441055 1948 ntBASIC3.86□□□□□ -1.79
BDNFP23560 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BDNFP23560 SNORD9-201ENST00000362566 104 ntBASIC3.86□□□□□ -1.79
BDNFP23560 RNU6-741P-201ENST00000383889 107 ntBASIC3.86□□□□□ -1.79
BDNFP23560 RPS29P4-201ENST00000414733 161 ntBASIC3.86□□□□□ -1.79
BDNFP23560 HMGB3P20-201ENST00000417997 600 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.86□□□□□ -1.79
BDNFP23560 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.86□□□□□ -1.79
BDNFP23560 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.86□□□□□ -1.79
BDNFP23560 AC010099.1-201ENST00000455434 375 ntBASIC3.86□□□□□ -1.79
BDNFP23560 RPS29P12-201ENST00000460178 152 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC091179.1-201ENST00000461606 579 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.86□□□□□ -1.79
BDNFP23560 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 AC147055.4-201ENST00000504399 745 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 AC010342.1-201ENST00000514047 877 ntBASIC3.86□□□□□ -1.79
BDNFP23560 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
BDNFP23560 ATP5F1P5-201ENST00000526403 760 ntBASIC3.86□□□□□ -1.79
BDNFP23560 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 AC008739.3-201ENST00000603262 127 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC010591.1-201ENST00000603941 649 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AL133507.1-201ENST00000605269 557 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC008121.2-201ENST00000614647 523 ntBASIC3.86□□□□□ -1.79
BDNFP23560 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
BDNFP23560 PCMTD1P7-201ENST00000634506 357 ntBASIC3.86□□□□□ -1.79
BDNFP23560 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BDNFP23560 FAM35CP-201ENST00000554755 2470 ntBASIC3.86□□□□□ -1.79
BDNFP23560 OR4G2P-202ENST00000641004 1759 ntBASIC3.86□□□□□ -1.79
BDNFP23560 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.86□□□□□ -1.79
BDNFP23560 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BDNFP23560 AC007656.2-201ENST00000624902 4547 ntBASIC3.85□□□□□ -1.79
BDNFP23560 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.85□□□□□ -1.79
BDNFP23560 ZNF29P-201ENST00000225587 168 ntBASIC3.85□□□□□ -1.79
BDNFP23560 RNU6-289P-201ENST00000364093 107 ntBASIC3.85□□□□□ -1.79
BDNFP23560 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BDNFP23560 RNU6-432P-201ENST00000384196 109 ntBASIC3.85□□□□□ -1.79
BDNFP23560 AL590084.2-201ENST00000401481 382 ntBASIC3.85□□□□□ -1.79
BDNFP23560 RNU6-584P-201ENST00000410350 95 ntBASIC3.85□□□□□ -1.79
BDNFP23560 MTCO1P17-201ENST00000411522 491 ntBASIC3.85□□□□□ -1.79
BDNFP23560 AC093578.1-201ENST00000415219 368 ntBASIC3.85□□□□□ -1.79
BDNFP23560 ELOCP9-201ENST00000418624 239 ntBASIC3.85□□□□□ -1.79
BDNFP23560 AC006960.1-201ENST00000419980 153 ntBASIC3.85□□□□□ -1.79
BDNFP23560 BX119904.4-201ENST00000424402 301 ntBASIC3.85□□□□□ -1.79
BDNFP23560 RPL7P46-201ENST00000425129 740 ntBASIC3.85□□□□□ -1.79
BDNFP23560 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.85□□□□□ -1.79
BDNFP23560 NDUFB1P1-201ENST00000435191 180 ntBASIC3.85□□□□□ -1.79
BDNFP23560 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.85□□□□□ -1.79
BDNFP23560 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.85□□□□□ -1.79
BDNFP23560 AC006499.5-201ENST00000505037 514 ntBASIC3.85□□□□□ -1.79
BDNFP23560 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.85□□□□□ -1.79
BDNFP23560 AC093809.1-201ENST00000509155 340 ntBASIC3.85□□□□□ -1.79
BDNFP23560 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.85□□□□□ -1.79
BDNFP23560 RNU6-1256P-201ENST00000516539 103 ntBASIC3.85□□□□□ -1.79
BDNFP23560 AC093331.1-201ENST00000521474 169 ntBASIC3.85□□□□□ -1.79
BDNFP23560 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.85□□□□□ -1.79
BDNFP23560 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.85□□□□□ -1.79
BDNFP23560 AC023161.2-201ENST00000551218 780 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms