Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL9A1P20849 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.22□□□□□ -1.41
COL9A1P20849 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.22□□□□□ -1.41
COL9A1P20849 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.22□□□□□ -1.41
COL9A1P20849 AC025470.1-201ENST00000510053 2032 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC126755.2-208ENST00000327792 462 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC138969.1-213ENST00000331436 462 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 RNA5SP52-201ENST00000362448 134 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 RNA5SP305-201ENST00000362665 119 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 RNA5SP479-201ENST00000364858 117 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 SNORA43.1-201ENST00000364863 140 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 Y_RNA.571-201ENST00000384753 98 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.22□□□□□ -1.41
COL9A1P20849 PPP1R11P2-201ENST00000423543 382 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.22□□□□□ -1.41
COL9A1P20849 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.22□□□□□ -1.41
COL9A1P20849 RN7SL72P-201ENST00000460697 269 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC073901.1-201ENST00000462471 408 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC097462.2-201ENST00000504623 481 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
COL9A1P20849 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.22□□□□□ -1.41
COL9A1P20849 BNIP3P5-201ENST00000562290 498 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC096996.1-201ENST00000563813 325 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 MIR1273C-201ENST00000578669 77 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AC027229.1-201ENST00000583887 253 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 AL450472.3-201ENST00000615578 367 ntBASIC6.22□□□□□ -1.41
COL9A1P20849 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL9A1P20849 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL9A1P20849 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL9A1P20849 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL9A1P20849 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL9A1P20849 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.21□□□□□ -1.41
COL9A1P20849 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL9A1P20849 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
COL9A1P20849 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.21□□□□□ -1.42
COL9A1P20849 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 Y_RNA.71-201ENST00000362892 104 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 RNU6-1255P-201ENST00000363434 112 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 ENSAP1-201ENST00000392855 326 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AL133482.1-201ENST00000415988 498 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AL117339.3-201ENST00000418733 162 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC090774.1-201ENST00000435925 246 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 Z82188.1-201ENST00000436709 154 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 AL137159.1-201ENST00000452808 512 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC100832.1-201ENST00000471945 383 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.21□□□□□ -1.42
COL9A1P20849 RPS21P4-201ENST00000487122 248 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC022493.1-201ENST00000492984 337 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.21□□□□□ -1.42
COL9A1P20849 ATP5F1P5-201ENST00000526403 760 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.21□□□□□ -1.42
COL9A1P20849 MIR548X2-201ENST00000579776 100 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 MIR3934-201ENST00000579806 107 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 AC005520.5-201ENST00000613926 164 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 MIR8080-201ENST00000622224 89 ntBASIC6.21□□□□□ -1.42
COL9A1P20849 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL9A1P20849 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.21□□□□□ -1.42
COL9A1P20849 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC6.21□□□□□ -1.42
COL9A1P20849 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL9A1P20849 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL9A1P20849 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL9A1P20849 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.21□□□□□ -1.42
COL9A1P20849 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.21□□□□□ -1.42
COL9A1P20849 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.2□□□□□ -1.42
COL9A1P20849 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL9A1P20849 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.2□□□□□ -1.42
COL9A1P20849 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL9A1P20849 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL9A1P20849 RNU6-227P-201ENST00000362865 103 ntBASIC6.2□□□□□ -1.42
COL9A1P20849 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.2□□□□□ -1.42
COL9A1P20849 RNU6-926P-201ENST00000384075 107 ntBASIC6.2□□□□□ -1.42
COL9A1P20849 MIR186-201ENST00000384988 86 ntBASIC6.2□□□□□ -1.42
COL9A1P20849 MIR301A-201ENST00000385261 86 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms